From S.C.DuartePinto at tudelft.nl  Tue Jul  2 12:27:50 2013
From: S.C.DuartePinto at tudelft.nl (Serge Duarte Pinto)
Date: Tue, 02 Jul 2013 12:27:50 +0200
Subject: [mcstas-users] Negative intensity reading on a PSD_monitor?
Message-ID: <51D2AB26.8040501@tudelft.nl>

Hello,

I am trying to simulate a spin precession setup that yields a spatial 
modulation pattern after an analyzer. The modulations clearly show up on 
the PSD_monitor (see screenshot), but curiously the downward swings go 
below zero intensity! I wonder how that is possible, and what I could 
possibly do against it. I also do not understand the units of intensity: 
I send a million neutrons to an area of 5 cm^2, to get intensities of 
the order 10^-13...



I attach the instrument description, together with the components 
Foil_flipper_magnet and Analyser_ideal it depends on. And the result I 
get when I run it.

Thanks in advance,
        Serge Duarte Pinto


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DEFINE INSTRUMENT SEMSANS()

TRACE 

COMPONENT arm = Arm()
AT (0,0,0) ABSOLUTE

COMPONENT Simple_source = Source_simple(
    radius = 0, yheight = 0.025, xwidth = 0.02, dist = 100,
    focus_xw = 0.01, focus_yh = 0.01, lambda0 = 2.1,
    dlambda = 0.01)
  AT (0, 0, 0) RELATIVE arm

COMPONENT polariser = Set_pol(px=1)
AT (0, 0, 0.5) RELATIVE arm

// 2.1 Angstrom neutrons in a precession field of 1mT precess one period in 6.45 cm.
COMPONENT B_field1=Pol_simpleBfield(xwidth=0.5, yheight=0.05, zdepth=2, Bx=0, By=0.001, Bz=0)
AT (0, 0, 1) RELATIVE arm

COMPONENT Foil_flipper_magnet1 = Foil_flipper_magnet(xwidth=0.18, yheight=0.06, zdepth=0.3, phi=0.09599, 
Bx=0, By=0.001, Bz=0, foil_in=1, verbose=1)
AT (0, 0, 2) RELATIVE arm

COMPONENT B_field_stop1=Pol_simpleBfield_stop(magnet_comp_stop=B_field1)
AT (0, 0, 3) RELATIVE arm

COMPONENT B_field2=Pol_simpleBfield(xwidth=0.5, yheight=0.05, zdepth=2, Bx=0, By=0.003, Bz=0)
AT (0, 0, 3.0001) RELATIVE arm

COMPONENT Foil_flipper_magnet2 = Foil_flipper_magnet(xwidth=0.18, yheight=0.06, zdepth=0.3, phi=0.09599, 
Bx=0, By=0.003, Bz=0, foil_in=1, verbose=1)
AT (0, 0, 4.0) RELATIVE arm

COMPONENT B_field_stop2=Pol_simpleBfield_stop(magnet_comp_stop=B_field2)
AT (0, 0, 5.0001) RELATIVE arm

COMPONENT analyser = Analyser_ideal(mx=1, my=0, mz=0)
AT (0, 0, 5.0002) RELATIVE arm

COMPONENT PSD = PSD_monitor(nx=1, ny=2048, filename="PSD", xwidth=0.025, yheight=0.025)
AT (0, 0, 5.0003) RELATIVE arm

FINALLY 
%{
 %}

END





















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/*******************************************************************************
*
* McStas, neutron ray-tracing package
*         Copyright 1997-2002, All rights reserved
*         Risoe National Laboratory, Roskilde, Denmark
*         Institut Laue Langevin, Grenoble, France
*
* Component: my_component
*
* %IDENTIFICATION
* Written by: MYSELF
* Date: NOW
* Version: $Revision: 0.01 $
* Origin: Risoe
* Release: McStas 1.12b
* Modified by: 
* %DESCRIPTION
* This is the description of this template component
*
* %PARAMETERS
* xwidth: width of the magnet [m]
* yheight: height of the magnet [m]
* zdepth: thickness of the magnet [m]
* Bxwidth: width of the B-field of thev component [m]
* Byheight: height of the B-field of the component [m]
* Bzdepth: thickness of the B-field of the component [m]
* phi: angle (from the xz-plane) of the foil-spinflipper inside the magnet [rd]
* Bx:      [T]       Parameter used for x component of field.
* By:      [T]       Parameter used for y component of field.
* Bz:      [T]       Parameter used for z component of field.
* fieldFunction [pointer] Function describing the magnetic field.
*
* %LINKS
*
* %END
****************************************************************************/

/*
  This comment will not be exported to mcdoc 
*/

DEFINE COMPONENT Foil_flipper_magnet
  DEFINITION PARAMETERS(field_function=const_magnetic_field, stray_field_function=NULL)
  SETTING PARAMETERS(xwidth, yheight, zdepth, Bxwidth=-1, Byheight=-1, Bzdepth=-1, phi=0.0, Bx,By,Bz,foil_in=1, correction_coil=1,verbose=1)
  OUTPUT PARAMETERS(inside_magnet)
STATE PARAMETERS (x,y,z,vx,vy,vz,t,sx,sy,p)
POLARISATION PARAMETERS (sx,sy,sz)

SHARE
%{
/* Declare structures and functions only once in each instrument. */
#ifndef POL_LIB_H
  %include "pol-lib"
#endif

    void foil_spin_flip(double *sx, double *sy, double *sz, double lambda, double phi){
      /*the spin flip is actually a precession around the field vector - in this case this vector is
       * in the foil plane, perp. to X, i.e. Z rotated by phi.*/ 
      //printf("pre_spin_flip=%g %g %g\n",*sx,*sy,*sz);
      double ux,uy,uz,s;
      //ux=0;uy=cos(phi);uz=-sin(phi);
      ux=0;uy=sin(phi);uz=cos(phi);
      /*Rodigues formula for roatating a vector around a unit vector.
       * v_rot=v*cos(theta) + uxv * sin(theta) + (u dot v)u(1-cos(theta)
       * theta=180 deg. => v_rot =-v + 2*(u dot v)u*/
      s=scalar_prod(ux,uy,uz,*sx,*sy,*sz);
      *sx=-*sx+2*s*ux;
      *sy=-*sy+2*s*uy;
      *sz=-*sz+2*s*uz;
      //printf("post_spin_flip=%g %g %g\n",*sx,*sy,*sz);
    }

  void const_foil_flipper_field(double x, double y, double z, double t, double *bx, double *by, double *bz){
    *bx=mcMagnetData[0];
    *by=mcMagnetData[1];
    *bz=mcMagnetData[2];
  }


%}

DECLARE
%{
  /*Declarations of variables used in the whole of the component*/
  double foil_n[3];
  Rotation spin_flip;
  double inside_magnet[6];
  int stray_fields;
  int stored;
%}

INITIALIZE
%{

  /*default is to have the foil horizontal*/
  Rotation foil_rot;
  Coords n,tmp;
  /*default is to have the foil horizontal*/
  n.x=0;n.y=1;n.z=0;
  rot_set_rotation(foil_rot,phi,0,0);
  tmp=rot_apply(foil_rot,n);
  foil_n[0]=tmp.x;foil_n[1]=tmp.y; foil_n[2]=tmp.z;
  /*setup spin-flip rotation. This is equivalent to mirroring in the foil plane.*/
  printf("foil normal (%s) %g %g %g\n",NAME_CURRENT_COMP, foil_n[0],foil_n[1],foil_n[2]); 
  /*copy-paste from simpleBfield.comp*/
  /*this should be a store_magnet type function in pol-lib i think*/
  Coords localG = rot_apply(ROT_A_CURRENT_COMP, coords_set(0,-GRAVITY,0));
  
  /*if desired compute the correction field along -Bz*/
  if (correction_coil){
    Bz=-By*tan(phi);
    printf("Correction coil is in - B=(%g %g %g)\n",Bx,By,Bz);
  }
 
  inside_magnet[0]=Bx;
  inside_magnet[1]=By;
  inside_magnet[2]=Bz;
  /*if the magnetic field dimensions are not given, we assume there are no stray fields.
    I.e. the magnetic field does not extend beyond the magnet gap*/
  if (Bxwidth!=-1 && Byheight!=-1 && Bzdepth!=-1){
    stray_fields=1;
  }
  if (Bxwidth==-1) Bxwidth=xwidth;
  if (Byheight==-1) Byheight=yheight;
  if (Bzdepth==-1) Bzdepth=zdepth;
  printf("xw,yh,zd=(%g %g %g), (Bxw,Byh,Bzd=(%g %g %g)\n",xwidth,yheight,zdepth,Bxwidth,Byheight,Bzdepth);
  
  if (foil_in)  printf("Foil is IN\n");
  else printf("Foil is OUT\n");
%}

TRACE
%{
  double t1,t2,t3,t4,dt;
  double sp,v;
  //mcmagnet_field_info *old_magnet,*outer_magnet;
  double *dd;
  int stored=0;

  /*check if we hit component at all*/
  if (plane_intersect(&t1,x,y,z,vx,vy,vz,0,0,1,0,0,-Bzdepth/2.0)==0){
    if(verbose) fprintf(stderr,"missed the magnetic field plane of %s\n",NAME_CURRENT_COMP);
    ABSORB;
  }
  v=sqrt(vx*vx + vy*vy + vz*vz);
  if ( (box_intersect(&t1, &t2, x, y, z, vx, vy, vz, Bxwidth, Byheight, Bzdepth))==0){
  /*propagate to the start of the component (which is -Bzdepth/2)*/
    if(verbose) fprintf(stderr,"missed the magnetic field of %s, %g %g %g\n",NAME_CURRENT_COMP,t1,t2,v);
    ABSORB;
  }
  if (t1<0){
    if(verbose) fprintf(stderr,"warning: neutron is already inside component %s on entry. t1=%g t2=%g\n",NAME_CURRENT_COMP,t1,t2);
  }else{
    PROP_DT(t1);
    t2=t2-t1;
  }
  
  if ( (box_intersect(&t3, &t4, x, y, z, vx, vy, vz,xwidth, yheight, zdepth))==0){
    if(verbose) fprintf(stderr,"missed the magnet %s gap\n",NAME_CURRENT_COMP);
    ABSORB;
  }
  /* t3 is the time for intersecting the first part of the area under the magnet - propagate to that*/
  if (t3>1e-9){
    PROP_DT(t3);
    t4=t4-t3;
    t2=t2-t3;
  }
  /*inject another field description for the magnetic field betweeen pole shoes.*/
  //outer_magnet=(mcmagnet_field_info *)
  if(stray_field_function) mcmagnet_pop();//this could be done with a stop bit in the magnet parameters
  double *tmp_data;
  Coords tmp_pos;
  Rotation tmp_rot;
  void (*tmp_field_func) (double, double, double, double, double*, double*, double*) = NULL;
  if(mcMagnet){
    stored=1;
    tmp_data=mcMagnetData;
    tmp_pos=mcMagnetPos;
    rot_copy(tmp_rot,mcMagnetRot);
    tmp_field_func=mcMagneticField;  
  }

  mcMagnetData=inside_magnet;
  mcMagnetPos=POS_A_CURRENT_COMP;
  rot_copy(mcMagnetRot,ROT_A_CURRENT_COMP);
  mcMagneticField=const_foil_flipper_field;
  MAGNET_ON;

  /*see if we hit the magnet walls before we exit*/
  if (plane_intersect(&dt,x,y,z,vx,vy,vz,0,0,1,0,0,zdepth/2.0)==0){
    fprintf(stderr,"missed the end plane of the magnet %s - this should not be\n",NAME_CURRENT_COMP);
    exit(-1);
    ABSORB;
  }
  if ( fabs(dt-t4)>FLT_EPSILON ) {
    if(verbose) fprintf(stderr,"hit magnet from inside gap %s\n",NAME_CURRENT_COMP);
    ABSORB;
  }

  /*neutron is inside magnet gap - propagate to the foil plane or leave the neutron if it does not hit the plane
    while inside the gap*/
  if (foil_in){
    //printf("xyz= (%g %g %g), vxyz= (%g %g %g)\n",x,y,z,vx,vy,vz);
    if (plane_intersect(&dt,x,y,z,vx,vy,vz,foil_n[0],foil_n[1],foil_n[2],0,0,0)==0 || dt<0 || dt>t4 ){
      //fprintf(stderr,"missed the foil flipper plane of %s (dt=%g)\n",NAME_CURRENT_COMP,dt);
      ABSORB;
      dt=dt;
    }
    else{
      PROP_DT(dt);
      t4=t4-dt;
      t2=t2-dt;
      /* at the foil - so flip spin/polarization*/
      foil_spin_flip(&sx,&sy,&sz,0.0,phi);
    }
  }
  /*propagate to the other end of the magnet gap*/
  PROP_DT(t4);
  t2=t2-t4;

  //dd=(double *) outer_magnet->data;
  //*(dd+5)=zdepth/2.0;
  if(stored){
    stored=0;
    mcMagnetData=tmp_data;
    mcMagnetPos=tmp_pos;
    rot_copy(mcMagnetRot,tmp_rot);
    mcMagneticField=tmp_field_func;  
  }
  else{
    MAGNET_OFF;
  }
  if (t2>1e-9){
    /*propagate to the end of the component*/
    PROP_DT(t2);
  }

%}

MCDISPLAY
%{
  double y=atan(phi)*zdepth/2.0;
  magnify("xy");
  box(0.0,0.0,0.0,Bxwidth,Byheight,Bzdepth);
  if (Bxwidth!=xwidth || Byheight!=yheight || Bzdepth!=zdepth){
    box(0,0,0,xwidth,yheight,zdepth);
  }
  /*draw the foil plane*/
  multiline(5,-xwidth/2.0,-y,-zdepth/2.0, xwidth/2.0,-y,-zdepth/2.0, xwidth/2.0,y,zdepth/2.0, -xwidth/2.0,y,zdepth/2.0, -xwidth/2.0,-y,-zdepth/2.0);
%}
END
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/*****************************************************************************
*
* McStas, neutron ray-tracing package
*         Copyright 1997-2006, All rights reserved
*         Risoe National Laboratory, Roskilde, Denmark
*         Institut Laue Langevin, Grenoble, France
*
* Component: Set_pol
*
* %I
* Written by: Erik Knudsen
* Date: June 2010
* Version: $Revision: 1.2 $
* Origin: Risoe
* Release: McStas 2.0
*
* (Unphysical) ideal analyzer.
*
* %D 
*
*
* Example: Analyser_ideal(mx=0, my=1, mz=0)
*
* %P
* INPUT PARAMETERS:
*
* mx:        X-component of polarisation analysis vector (can be negative) (1)
* my:        Y-component of polarisation analysis  vector (can be negative) (1)
* mz:        Z-component of polarisation analysis  vector (can be negative) (1)
*
* OUTPUT PARAMETERS:
*
* %E
*******************************************************************************/

  DEFINE COMPONENT Analyser_ideal
DEFINITION PARAMETERS ()
  SETTING PARAMETERS (mx=0, my=0, mz=0)

STATE PARAMETERS (x,y,z,vx,vy,vz,t,sx,sy,p)
POLARISATION PARAMETERS (sx,sy,sz)

DECLARE
%{
  %}

INITIALIZE
%{
  if (mx==1 && my==1 && mz==1) {
    printf("Analyser_ideal: %s: NULL vector defined!\n"
	   "ERROR      (px, py, pz). Exiting",
           NAME_CURRENT_COMP);
    exit(1);
  }
  
  if ((mx*mx + my*my + mz*mz) > 1) {
    printf("Set_pol: %s: Polarisation analysis vector (mx, my, mz) is unphysical!\n"
	   "ERROR  mx*mx + my*my + mz*mz > 1. Exiting....",
           NAME_CURRENT_COMP);
    exit(1);
  }
  
  NORM(mx,my,mz);
%}

TRACE
%{
  double prob_up;
  /*the probablilty for having spin "up" along the quantization driection m*/
  prob_up=(1+scalar_prod(sx,sy,sz,mx,my,mx))/2.0;
  /*adjust weight accordingly (i.e. monte carlo choice with prob. 1)*/
  p*=prob_up;
  sx=mx;sy=my;sz=mz;
  SCATTER;
%}

MCDISPLAY
%{
  /* A bit ugly; hard-coded dimensions. */
  magnify("xy");
  line(0,0,0,0.2,0,0);
  line(0,0,0,0,0.2,0);
  line(0,0,0,0,0,0.2);

  line(0,0,0,0.2*mx,0.2*my,0.2*mz);
  /*draw the arrowhead*/
  double cos2=cos(2*DEG2RAD);
  double sin2=sin(2*DEG2RAD);
  multiline(4,0.18*(mx*cos2+my*sin2),0.18*(-mx*sin2+my*cos2),0.18*mz,
      0.18*(mx*cos2+mz*sin2),0.18*my,0.18*(-mx*sin2+mz*cos2),
      0.18*mx,0.18*(my*cos2+mz*sin2),0.18*(-my*sin2+mz*cos2),
      0.18*(mx*cos2+my*sin2),0.18*(-mx*sin2+my*cos2),0.18*mz);

  line(0.2*mx,0.2*my,0.2*mz,0.18*(mx*cos2+my*sin2),0.18*(-mx*sin2+my*cos2),0.18*mx);
  line(0.2*mx,0.2*my,0.2*mz,0.18*(mx*cos2+mz*sin2),0.18*my,0.18*(-mx*sin2+mz*cos2));
  line(0.2*mx,0.2*my,0.2*mz,0.18*mx,0.18*(my*cos2+mz*sin2),0.18*(-my*sin2+mz*cos2));
%}

END
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# Format: McStas with text headers file. Use mcplot/PGPLOT to view.
# URL:    http://www.mccode.org/
# Editor: mcstas on localhost
# Creator:SEMSANS (C:/mcstas-2.0/lib/examples/Modulations.instr) simulation (McStas 2.0 - Dec. 21, 2012)
# Date:   Simulation started (1372756094) Tue Jul 02 11:08:14 2013
# File:   PSD.sim
# Ncount: 1e+006
# Trace: no
# Gravitation: no
# Seed: 1372248170
# type: array_1d(2048)
# Source: C:/mcstas-2.0/lib/examples/Modulations.instr
# component: PSD
# position: 0 0 5.0003
# title: PSD monitor
# Ncount: 1e+006
# filename: PSD.sim
# format: McStas with text headers
# statistics: X0=-0.0107082; dX=0.676089;
# signal: Min=-1.12523e-013; Max=6.6366e-013; Mean=2.40606e-013;
# values: 4.92762e-010 6.90922e-013 1e+006
# xvar: Y 
# yvar: (I,I_err)
# xlabel: Y position [cm]
# ylabel: I
# xlimits: -1.25 1.25
# variables: Y  I I_err N
# Data [PSD_sim/PSD.sim] I: 
-1.24938964844 0 0 0 
-1.24816894531 0 0 0 
-1.24694824219 0 0 0 
-1.24572753906 0 0 0 
-1.24450683594 0 0 0 
-1.24328613281 0 0 0 
-1.24206542969 0 0 0 
-1.24084472656 0 0 0 
-1.23962402344 0 0 0 
-1.23840332031 0 0 0 
-1.23718261719 0 0 0 
-1.23596191406 0 0 0 
-1.23474121094 0 0 0 
-1.23352050781 0 0 0 
-1.23229980469 0 0 0 
-1.23107910156 0 0 0 
-1.22985839844 0 0 0 
-1.22863769531 0 0 0 
-1.22741699219 0 0 0 
-1.22619628906 0 0 0 
-1.22497558594 0 0 0 
-1.22375488281 0 0 0 
-1.22253417969 0 0 0 
-1.22131347656 0 0 0 
-1.22009277344 0 0 0 
-1.21887207031 0 0 0 
-1.21765136719 0 0 0 
-1.21643066406 0 0 0 
-1.21520996094 0 0 0 
-1.21398925781 0 0 0 
-1.21276855469 0 0 0 
-1.21154785156 3.16606805908e-015 8.80472342764e-016 15 
-1.21032714844 3.27095505087e-015 8.63632883404e-016 17 
-1.20910644531 5.2417865784e-015 1.06619306629e-015 33 
-1.20788574219 5.92385743233e-015 1.02117248544e-015 55 
-1.20666503906 7.28852541708e-015 1.14503895037e-015 65 
-1.20544433594 5.77006991589e-015 9.35007055344e-016 81 
-1.20422363281 3.80305054209e-015 7.9934197398e-016 88 
-1.20300292969 1.16515783634e-015 6.65397093584e-016 82 
-1.20178222656 -7.30046850979e-016 7.19675649636e-016 111 
-1.20056152344 -2.94096001254e-015 7.34412508865e-016 110 
-1.19934082031 -7.2699860717e-015 9.94775229932e-016 153 
-1.19812011719 -9.88966031342e-015 1.11012563496e-015 153 
-1.19689941406 -1.43197755609e-014 1.3389400138e-015 157 
-1.19567871094 -1.82843972495e-014 1.53974962752e-015 171 
-1.19445800781 -2.19550039628e-014 1.76189499539e-015 179 
-1.19323730469 -2.53625391563e-014 1.93961881771e-015 188 
-1.19201660156 -3.16376232809e-014 2.20229336251e-015 223 
-1.19079589844 -3.88997280657e-014 2.54096344482e-015 247 
-1.18957519531 -4.27104643615e-014 2.7093251537e-015 258 
-1.18835449219 -4.41683093209e-014 2.81181821525e-015 253 
-1.18713378906 -5.1907800113e-014 3.1000963522e-015 285 
-1.18591308594 -4.29058673681e-014 2.8337136364e-015 232 
-1.18469238281 -5.57239077484e-014 3.24762563547e-015 297 
-1.18347167969 -5.444480722e-014 3.22213530981e-015 287 
-1.18225097656 -6.14348697831e-014 3.40437160754e-015 327 
-1.18103027344 -6.67252905694e-014 3.52824240138e-015 359 
-1.17980957031 -6.31968082509e-014 3.40881155093e-015 345 
-1.17858886719 -5.90164177511e-014 3.25283428375e-015 331 
-1.17736816406 -6.33186823499e-014 3.29440087034e-015 373 
-1.17614746094 -5.95515269014e-014 3.1288878972e-015 368 
-1.17492675781 -5.76964336147e-014 3.00030440001e-015 378 
-1.17370605469 -5.63926220325e-014 2.86653527141e-015 402 
-1.17248535156 -5.01777275011e-014 2.6098241581e-015 390 
-1.17126464844 -4.55397047269e-014 2.3620132256e-015 406 
-1.17004394531 -4.14103805202e-014 2.1343855462e-015 444 
-1.16882324219 -3.57762625416e-014 1.89749794534e-015 458 
-1.16760253906 -2.75342807059e-014 1.59662327109e-015 450 
-1.16638183594 -1.72816061651e-014 1.30506132876e-015 467 
-1.16516113281 -9.54805288773e-015 1.26599510994e-015 503 
-1.16394042969 3.79152387509e-015 1.24598250479e-015 502 
-1.16271972656 1.3082624428e-014 1.43523028818e-015 515 
-1.16149902344 2.71656711097e-014 1.7903936918e-015 519 
-1.16027832031 4.17701832653e-014 2.33945596868e-015 511 
-1.15905761719 6.04916026308e-014 3.06462209052e-015 514 
-1.15783691406 6.52756570747e-014 3.31218125114e-015 493 
-1.15661621094 8.70984593903e-014 4.17341988521e-015 510 
-1.15539550781 9.86714987799e-014 4.64643939965e-015 512 
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1.21276855469 2.25374909157e-015 1.59364471906e-015 2 
1.21398925781 0 0 0 
1.21520996094 0 0 0 
1.21643066406 0 0 0 
1.21765136719 0 0 0 
1.21887207031 0 0 0 
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1.22131347656 0 0 0 
1.22253417969 0 0 0 
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1.23107910156 0 0 0 
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1.23474121094 0 0 0 
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1.23718261719 0 0 0 
1.23840332031 0 0 0 
1.23962402344 0 0 0 
1.24084472656 0 0 0 
1.24206542969 0 0 0 
1.24328613281 0 0 0 
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1.24572753906 0 0 0 
1.24694824219 0 0 0 
1.24816894531 0 0 0 
1.24938964844 0 0 0 
# EndDate:Tue Jul 02 11:08:14 2013

From pkwi at fysik.dtu.dk  Tue Jul  2 13:17:09 2013
From: pkwi at fysik.dtu.dk (=?Windows-1252?Q?Peter_Kj=E6r_Willendrup?=)
Date: Tue, 2 Jul 2013 11:17:09 +0000
Subject: [mcstas-users] Negative intensity reading on a PSD_monitor?
In-Reply-To: <51D2AB26.8040501@tudelft.nl>
References: <51D2AB26.8040501@tudelft.nl>
Message-ID: <C2B7A140-6C0B-4F9D-B63F-74CADDADB556@fysik.dtu.dk>

Dear Serge,

On Jul 2, 2013, at 12:27 , Serge Duarte Pinto <S.C.DuartePinto at tudelft.nl<mailto:S.C.DuartePinto at tudelft.nl>>
 wrote:

I am trying to simulate a spin precession setup that yields a spatial modulation pattern after an analyzer. The modulations clearly show up on the PSD_monitor (see screenshot), but curiously the downward swings go below zero intensity! I wonder how that is possible, and what I could possibly do against it.

True, negative intensities does not sound completely right? :-) I will have a closer look at this together with Erik Knudsen who implemented most of the polarisation support.

Is it correctly understood that the two included comps are your own codes?

I also do not understand the units of intensity: I send a million neutrons to an area of 5 cm^2, to get intensities of the order 10^-13?

This one I should be able to explain:

You are using Source_simple which by default has an intensity of 1 neutrons/sec/cm^2/(4*PI)/?.

In your instrument file I see that you assign a focusing to only 1x1cm at a distance of 100 m which brings your emitted intensity down to something like 1e-9, and distributed over your 1e6 rays, this easily gives the low intensities you are seeing.

I attach the instrument description, together with the components Foil_flipper_magnet and Analyser_ideal it depends on. And the result I get when I run it.

Thanks, I will have a closer look.

Best,

Peter

Peter Kj?r Willendrup
Senior Research Engineer, Special Advisor

DTU Physics





Technical University of Denmark



[cid:image002.gif at 01CCCAF1.5E6331F0][cid:EC2A3CAB-AF57-4CEB-96B0-23F6DC35FE76 at fysik.dtu.dk]







Department of Physics
Neutrons and X-rays for Materials Physics
Fysikvej

Building 307

DK-2800 Kongens Lyngby

Direct +45 2125 4612

Mobil +45 2125 4612
Fax +45 4593 2399


pkwi at fysik.dtu.dk<mailto:pkwi at fysik.dtu.dk>



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From pkwi at fysik.dtu.dk  Thu Jul  4 19:01:55 2013
From: pkwi at fysik.dtu.dk (=?iso-8859-1?Q?Peter_Kj=E6r_Willendrup?=)
Date: Thu, 4 Jul 2013 17:01:55 +0000
Subject: [mcstas-users] First Circular: Joint Vitess and McStas School and
 Workshop in Berlin, September 18th-20th
Message-ID: <A3FDAE2A-FA37-4BF1-99F0-668FAF7E0252@fysik.dtu.dk>

Hello fellow simulators!


The joint Vitess and McStas teams are planning a common simulation school and workshop this fall - scheduled for


September 18th-20th in the Berlin area.


A rough program of the three-day school is:

Day 1: Introduction and tutorials for the two packages, intended mainly for new users. Hands-on exercises.

Day 2: Advanced features demonstrated by examples and talks. Hands-on exercises.

Day 3: Users have an option to present their own work, give feedback and suggestions for new features.


To have an estimate of the number of participants, please send us a short email to vitess at helmholtz-berlin.de<mailto:vitess at helmholtz-berlin.de> indicating this, preferably before the end of July. If you are already experienced with the packages and hence would like to skip the first day, please also indicate this.

Send us the email does not oblige you to participate. :-)


All the best from the combined Vitess and McStas teams!




Peter Kj?r Willendrup
Senior Research Engineer, Special Advisor

DTU Physics





Technical University of Denmark



[cid:image002.gif at 01CCCAF1.5E6331F0][cid:EC2A3CAB-AF57-4CEB-96B0-23F6DC35FE76 at fysik.dtu.dk]







Department of Physics
Neutrons and X-rays for Materials Physics
Fysikvej

Building 307

DK-2800 Kongens Lyngby

Direct +45 2125 4612

Mobil +45 2125 4612
Fax +45 4593 2399


pkwi at fysik.dtu.dk<mailto:pkwi at fysik.dtu.dk>



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From robert.dalgliesh at stfc.ac.uk  Wed Jul 10 14:29:12 2013
From: robert.dalgliesh at stfc.ac.uk (robert.dalgliesh at stfc.ac.uk)
Date: Wed, 10 Jul 2013 12:29:12 +0000
Subject: [mcstas-users] mcstas Matlab output
Message-ID: <9FD256ED3764AA40BD335311A4123FA01DBAE274@EXCHMBX03.fed.cclrc.ac.uk>

Hi,
I've discovered a reasonably large problem with the mcstas-2.0 option to create directories for output with long paths.

Matlab has a limit of 63 characters for variable names. The way that the variables get constructed in the mcstas.m file then breaks with a relatively short path.

e.g. /home/user/instrument/with_sample/with_sample_date_time               etc. etc.

This results in truncation of the variable names.

My guess is that the mcstas.m script needs to be modified to shorten the variable name stored in the ans.mc_detector
Structure.

Not sure where the stuff that builds the output is located though

Rob

===================================
Dr. Robert Dalgliesh
ISIS
STFC Rutherford Appleton Laboratory
R3 1.29
Harwell Oxford
Didcot
OX11 0QX
Office Tel: +44 (0) 1235 445687 or OffSpec Instrument: +44 (0) 1235 567045
Internal Mobile Extension: 1176
e-mail: robert.dalgliesh at stfc.ac.uk<mailto:robert.dalgliesh at stfc.ac.uk>


-- 
Scanned by iCritical.

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From pkwi at fysik.dtu.dk  Wed Jul 10 15:51:50 2013
From: pkwi at fysik.dtu.dk (=?Windows-1252?Q?Peter_Kj=E6r_Willendrup?=)
Date: Wed, 10 Jul 2013 13:51:50 +0000
Subject: [mcstas-users] mcstas Matlab output
In-Reply-To: <9FD256ED3764AA40BD335311A4123FA01DBAE274@EXCHMBX03.fed.cclrc.ac.uk>
References: <9FD256ED3764AA40BD335311A4123FA01DBAE274@EXCHMBX03.fed.cclrc.ac.uk>
Message-ID: <48593D6B-2478-4CF5-9B48-34208B384891@fysik.dtu.dk>

Hi Rob,


Thanks for reporting this, will see what can be done about this!

Is it correctly understood that you see this when using mcplot (Matlab) from mcgui?


Best,

Peter


On Jul 10, 2013, at 13:29 , <robert.dalgliesh at stfc.ac.uk<mailto:robert.dalgliesh at stfc.ac.uk>>
 wrote:

Hi,
I?ve discovered a reasonably large problem with the mcstas-2.0 option to create directories for output with long paths.

Matlab has a limit of 63 characters for variable names. The way that the variables get constructed in the mcstas.m file then breaks with a relatively short path.

e.g. /home/user/instrument/with_sample/with_sample_date_time               etc. etc.

This results in truncation of the variable names.

My guess is that the mcstas.m script needs to be modified to shorten the variable name stored in the ans.mc_detector
Structure.

Not sure where the stuff that builds the output is located though

Rob

===================================
Dr. Robert Dalgliesh
ISIS
STFC Rutherford Appleton Laboratory
R3 1.29
Harwell Oxford
Didcot
OX11 0QX
Office Tel: +44 (0) 1235 445687 or OffSpec Instrument: +44 (0) 1235 567045
Internal Mobile Extension: 1176
e-mail: robert.dalgliesh at stfc.ac.uk<mailto:robert.dalgliesh at stfc.ac.uk>



--
Scanned by iCritical.

_______________________________________________
mcstas-users mailing list
mcstas-users at mcstas.org<mailto:mcstas-users at mcstas.org>
http://mailman.mcstas.org/cgi-bin/mailman/listinfo/mcstas-users

Peter Kj?r Willendrup
Senior Research Engineer, Special Advisor

DTU Physics





Technical University of Denmark



[cid:image002.gif at 01CCCAF1.5E6331F0][cid:EC2A3CAB-AF57-4CEB-96B0-23F6DC35FE76 at fysik.dtu.dk]







Department of Physics
Neutrons and X-rays for Materials Physics
Fysikvej

Building 307

DK-2800 Kongens Lyngby

Direct +45 2125 4612

Mobil +45 2125 4612
Fax +45 4593 2399


pkwi at fysik.dtu.dk<mailto:pkwi at fysik.dtu.dk>



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From pkwi at fysik.dtu.dk  Fri Aug  9 07:02:42 2013
From: pkwi at fysik.dtu.dk (=?iso-8859-1?Q?Peter_Kj=E6r_Willendrup?=)
Date: Fri, 9 Aug 2013 05:02:42 +0000
Subject: [mcstas-users] First Circular: Joint Vitess and McStas School
 and Workshop in Berlin, September 18th-20th
In-Reply-To: <A3FDAE2A-FA37-4BF1-99F0-668FAF7E0252@fysik.dtu.dk>
References: <A3FDAE2A-FA37-4BF1-99F0-668FAF7E0252@fysik.dtu.dk>
Message-ID: <8E9E6089-83AF-4BFA-9A96-766078892821@fysik.dtu.dk>

Dear colleagues,


The registration for the "Joint Vitess and McStas school & workshop"

September 18th-20th in Berlin at the Grand City Hotel Globus Berlin.

is now open.

Please register visiting the following website: https://www.helmholtz-berlin.de/events/joint-vitess/index_de.html

Please make your own arrangements with the meeting hotel. Refer to "HZB" or "neutron simulation school" when booking your room that they know you belong to the workshop.


We are looking forward to seeing you in Berlin!


Peter Willendrup on behalf of the organisers



On Jul 4, 2013, at 07:01 , Peter Kj?r Willendrup <pkwi at fysik.dtu.dk> wrote:

Hello fellow simulators!


The joint Vitess and McStas teams are planning a common simulation school and workshop this fall - scheduled for


September 18th-20th in the Berlin area.


A rough program of the three-day school is:

Day 1: Introduction and tutorials for the two packages, intended mainly for new users. Hands-on exercises.

Day 2: Advanced features demonstrated by examples and talks. Hands-on exercises.

Day 3: Users have an option to present their own work, give feedback and suggestions for new features.


To have an estimate of the number of participants, please send us a short email to vitess at helmholtz-berlin.de<mailto:vitess at helmholtz-berlin.de> indicating this, preferably before the end of July. If you are already experienced with the packages and hence would like to skip the first day, please also indicate this.

Send us the email does not oblige you to participate. :-)


All the best from the combined Vitess and McStas teams!




Peter Kj?r Willendrup
Senior Research Engineer, Special Advisor

DTU Physics


<image001.gif>


Technical University of Denmark



<image002.gif><nexmap.jpg>







Department of Physics
Neutrons and X-rays for Materials Physics
Fysikvej

Building 307

DK-2800 Kongens Lyngby

Direct +45 2125 4612

Mobil +45 2125 4612
Fax +45 4593 2399


pkwi at fysik.dtu.dk<mailto:pkwi at fysik.dtu.dk>



_______________________________________________
mcstas-users mailing list
mcstas-users at mcstas.org
http://mailman.mcstas.org/cgi-bin/mailman/listinfo/mcstas-users



Peter Kj?r Willendrup
Senior Research Engineer, Special Advisor

DTU Physics





Technical University of Denmark



[cid:image002.gif at 01CCCAF1.5E6331F0][cid:EC2A3CAB-AF57-4CEB-96B0-23F6DC35FE76 at fysik.dtu.dk]








Department of Physics
Neutrons and X-rays for Materials Physics
Fysikvej

Building 307

DK-2800 Kongens Lyngby

Direct +45 2125 4612

Mobil +45 2125 4612
Fax +45 4593 2399


pkwi at fysik.dtu.dk<mailto:pkwi at fysik.dtu.dk>



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From hjelm at lanl.gov  Fri Aug  9 20:01:21 2013
From: hjelm at lanl.gov (Hjelm, Rex r)
Date: Fri, 9 Aug 2013 18:01:21 +0000
Subject: [mcstas-users] Posting of open Deputy Group Leader position at the
 Lujan Neutron Scattering Center
In-Reply-To: <8E9E6089-83AF-4BFA-9A96-766078892821@fysik.dtu.dk>
Message-ID: <CE2A8A8C.FD78%hjelm@lanl.gov>

I want to distribute, using your mail list, the enclosed announcement for an open position of Deputy Group Leader at the Lujan Neutron Scattering Center.

Rex Hjelm
Search committee chairman
Beginning of message text:

Los Alamos National Laboratory is seeking a Deputy Group Leader for the Lujan Neutron Scattering Center. Attached is a copy of the job description. Potential candidates can access the job site at
https://ebsp1.lanl.gov:443/OA_HTML/OA.jsp?OAFunc=IRC_VIS_VAC_DISPLAY&p_svid=18912&p_spid=838172

Interested applicants must use the above link to apply online.  External candidates need to create a profile to apply.
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From pkwi at fysik.dtu.dk  Fri Aug 30 16:29:02 2013
From: pkwi at fysik.dtu.dk (=?iso-8859-1?Q?Peter_Kj=E6r_Willendrup?=)
Date: Fri, 30 Aug 2013 14:29:02 +0000
Subject: [mcstas-users] Fwd: [Neutron] First Circular: Joint Vitess and
 McStas School and Workshop in Berlin, September 18th-20th
References: <5220A4C1.5040508@helmholtz-berlin.de>
Message-ID: <83DEDEE4-A6F3-480C-95E3-660621B5BF18@fysik.dtu.dk>

FYI

Begin forwarded message:

From: Daniil Nekrassov <daniil.nekrassov at helmholtz-berlin.de<mailto:daniil.nekrassov at helmholtz-berlin.de>>
Subject: Re: [Neutron] [mcstas-users] First Circular: Joint Vitess and McStas School and Workshop in Berlin, September 18th-20th
Date: August 30, 2013 15:57:21 GMT+02:00
To: <neutron at neutronsources.org<mailto:neutron at neutronsources.org>>, "Lieutenant, Klaus" <klaus.lieutenant at helmholtz-berlin.de<mailto:klaus.lieutenant at helmholtz-berlin.de>>, Peter Kj?r Willendrup <pkwi at fysik.dtu.dk<mailto:pkwi at fysik.dtu.dk>>

Dear colleagues,

this is the final call for the "Joint Vitess and McStas school & workshop"  to be held on September 18th-20th in Berlin at the Grand City Hotel Globus Berlin. We still have capacity for a small number of participants. If you intend to take part in the workshop, please register using the link below until 04.09.13.

https://www.helmholtz-berlin.de/events/joint-vitess/index_de.html

We kindly ask all participants to book their room by either sending an e-mail to info.ber07 at grandcityhotels.com<mailto:info.ber07 at grandcityhotels.com> or katrin.sieben at gchbm.de<mailto:katrin.sieben at gchbm.de> or by calling +49 (0) 30 555 07<tel:%2B49%20%280%29%2030%20555%2007> 0 or +49 (0) 30 4950003224<tel:%2B49%20%280%29%2030%204950003224>. Please state that you participate in the "neutron simulation school". Note that we cannot guarantee that there are still rooms available at the conference hotel, since our reservation ran out this week.


On behalf of the organizers,
Daniil Nekrassov

Am 09.08.2013 07:02, schrieb Peter Kj?r Willendrup:
Dear colleagues,


The registration for the "Joint Vitess and McStas school & workshop"

September 18th-20th in Berlin at the Grand City Hotel Globus Berlin.

is now open.

Please register visiting the following website: https://www.helmholtz-berlin.de/events/joint-vitess/index_de.html

Please make your own arrangements with the meeting hotel. Refer to "HZB" or "neutron simulation school" when booking your room that they know you belong to the workshop.


We are looking forward to seeing you in Berlin!


Peter Willendrup on behalf of the organisers



On Jul 4, 2013, at 07:01 , Peter Kj?r Willendrup <pkwi at fysik.dtu.dk><mailto:pkwi at fysik.dtu.dk> wrote:

Hello fellow simulators!


The joint Vitess and McStas teams are planning a common simulation school and workshop this fall - scheduled for


September 18th-20th in the Berlin area.


A rough program of the three-day school is:

Day 1: Introduction and tutorials for the two packages, intended mainly for new users. Hands-on exercises.

Day 2: Advanced features demonstrated by examples and talks. Hands-on exercises.

Day 3: Users have an option to present their own work, give feedback and suggestions for new features.


To have an estimate of the number of participants, please send us a short email to vitess at helmholtz-berlin.de<mailto:vitess at helmholtz-berlin.de> indicating this, preferably before the end of July. If you are already experienced with the packages and hence would like to skip the first day, please also indicate this.

Send us the email does not oblige you to participate. :-)


All the best from the combined Vitess and McStas teams!




Peter Kj?r Willendrup
Senior Research Engineer, Special Advisor


DTU Physics


<image001.gif>


Technical University of Denmark



<image002.gif><nexmap.jpg>







Department of Physics
Neutrons and X-rays for Materials Physics
Fysikvej

Building 307

DK-2800 Kongens Lyngby

Direct +45 2125 4612

Mobil +45 2125 4612
Fax +45 4593 2399


pkwi at fysik.dtu.dk<mailto:pkwi at fysik.dtu.dk>



_______________________________________________
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mcstas-users at mcstas.org<mailto:mcstas-users at mcstas.org>
http://mailman.mcstas.org/cgi-bin/mailman/listinfo/mcstas-users



Peter Kj?r Willendrup
Senior Research Engineer, Special Advisor


DTU Physics





Technical University of Denmark



[cid:part10.08040804.08030305 at helmholtz-berlin.de][cid:part11.06070507.06060306 at helmholtz-berlin.de]








Department of Physics
Neutrons and X-rays for Materials Physics
Fysikvej

Building 307

DK-2800 Kongens Lyngby

Direct +45 2125 4612

Mobil +45 2125 4612
Fax +45 4593 2399


pkwi at fysik.dtu.dk<mailto:pkwi at fysik.dtu.dk>






_______________________________________________
Neutron mailing list
Neutron at neutronsources.org<mailto:Neutron at neutronsources.org>
http://neutronsources.org/mailman/listinfo/neutron



________________________________

Helmholtz-Zentrum Berlin f?r Materialien und Energie GmbH

Mitglied der Hermann von Helmholtz-Gemeinschaft Deutscher Forschungszentren e.V.

Aufsichtsrat: Vorsitzender Prof. Dr. Dr. h.c. mult. Joachim Treusch, stv. Vorsitzende Dr. Beatrix Vierkorn-Rudolph
Gesch?ftsf?hrung: Prof. Dr. Anke Rita Kaysser-Pyzalla, Thomas Frederking

Sitz Berlin, AG Charlottenburg, 89 HRB 5583

Postadresse:
Hahn-Meitner-Platz 1
D-14109 Berlin

http://www.helmholtz-berlin.de

Peter Kj?r Willendrup
Senior Research Engineer, Special Advisor

DTU Physics



Technical University of Denmark



[cid:image002.gif at 01CCCAF1.5E6331F0][cid:EC2A3CAB-AF57-4CEB-96B0-23F6DC35FE76 at fysik.dtu.dk]

Department of Physics
Neutrons and X-rays for Materials Physics
Fysikvej

Building 307

DK-2800 Kongens Lyngby

Direct +45 2125 4612

Mobil +45 2125 4612
Fax +45 4593 2399


pkwi at fysik.dtu.dk<mailto:pkwi at fysik.dtu.dk>

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From pkwi at fysik.dtu.dk  Tue Sep  3 12:20:58 2013
From: pkwi at fysik.dtu.dk (=?iso-8859-1?Q?Peter_Kj=E6r_Willendrup?=)
Date: Tue, 3 Sep 2013 10:20:58 +0000
Subject: [mcstas-users] Workaround for installing McStas on Windows without
 an active internet connection
Message-ID: <33296BE3-5180-4A31-BDB8-20F199AB0A8D@fysik.dtu.dk>

Hi all,


If you had problems getting McStas 2.0 installed on a windows system, perhaps these hints will help you out:


What is not completely clear from the McStas install docs is that on the Windows platform, an active internet connection is required during installation.

To work around this, perform these steps before installing McStas itself:

  *   Download and install a Strawberry Perl 5.16 for your system from http://strawberryperl.com<http://strawberryperl.com/>
  *   Download this zip file<http://ppds.mccode.org/ZipPackage/PPDs.zip> (rightclik, save as)
  *   Unzip the Zip file and using a command window, cd to the folder
  *   Run the enclosed

postsetup.bat

After these steps, install the McStas packages in this order:

  *   McStas core package (mcstas-NSIS-2.0-*.exe)
  *   McStas component package (mcstas-comps-NSIS-2.0-*.exe)
  *   McStas Perl tool package (mcstas-tools-perl-NSIS-2.0-*.exe)
  *   - then the optional Python packages if wanted

Once everything is installed, use the new links on your desktop for either starting mcgui directly or starting a "mcstas environment shell" with mcrun, mcplot, mcgui etc.


All of this stuff should be easier with 2.1 as we will (again) have a simpler, unified installer...


Best and sorry for the inconvenience,

Peter Willendrup

Peter Kj?r Willendrup
Senior Research Engineer, Special Advisor

DTU Physics



Technical University of Denmark



[cid:image002.gif at 01CCCAF1.5E6331F0][cid:EC2A3CAB-AF57-4CEB-96B0-23F6DC35FE76 at fysik.dtu.dk]

Department of Physics
Neutrons and X-rays for Materials Physics
Fysikvej

Building 307

DK-2800 Kongens Lyngby

Direct +45 2125 4612

Mobil +45 2125 4612
Fax +45 4593 2399


pkwi at fysik.dtu.dk<mailto:pkwi at fysik.dtu.dk>

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From Deon.Marais at necsa.co.za  Mon Sep 16 15:25:22 2013
From: Deon.Marais at necsa.co.za (Deon Marais)
Date: Mon, 16 Sep 2013 13:25:22 +0000
Subject: [mcstas-users] Problem: Virtual_input and Virtual_output components
	in McStas 2.0
Message-ID: <EF26ABED17A38F4F9F934CB3952AE2911C5985@NECAS0650.necsa.co.za>

Good day,

I am having a bit of a problem using the Virtual_input and Virtual_output components in McStas 2.0. I have set up the following small example derived from a previous post (http://mailman.mcstas.org/pipermail/mcstas-users/2005q2/001509.html) with minor changes for compatibility.

Instrument to create the event file
//**********************************
DEFINE INSTRUMENT out()

TRACE

COMPONENT Origin = Arm()
  AT (0,0,0) ABSOLUTE

COMPONENT source = Source_simple(
    radius = 0.1, dist = 10, xwidth = 0.1, yheight = 0.1, E0 = 5,  dE = 0.5)
  AT (0, 0, 0) RELATIVE Origin

COMPONENT Vout = Virtual_output(
    filename = "vout.dat", bufsize = 0, type="double")
  AT (0, 0, 10) RELATIVE Origin

COMPONENT PSD = PSD_monitor(
    nx = 128, ny = 128, filename = "PSD", xmin = -0.1,  xmax = 0.1, ymin = -0.1, ymax = 0.1)
  AT (0, 0, 11) RELATIVE Origin

END

Instrument that reads from the event file
//**********************************
DEFINE INSTRUMENT input()

TRACE

COMPONENT Origin = Arm()
  AT (0,0,0) ABSOLUTE

COMPONENT source = Virtual_input(
    filename = "vout.dat", type = "double", repeat_count = 10)
  AT (0, 0, 10) RELATIVE Origin

COMPONENT PSD = PSD_monitor(
    nx = 128, ny = 128, filename = "PSD", xmin = -0.1,  xmax = 0.1, ymin = -0.1, ymax = 0.1)
  AT (0, 0, 11) RELATIVE Origin

END

//***********************************


?         When running the ?out? instrument, everything seems to work fine from the following console output and the attached PSD screenshot(PSD_Out.png):
Detector: PSD_I=0.00539967 PSD_ERR=5.39967e-006 PSD_N=1e+006 "PSD.sim"
Virtual_output: Vout: Saved  1000000.000000 events (all) in file vout.dat


?         When running the ?input? instrument, I get the following console output and an obviously wrong PSD distribution (PSD_Input.png)
Detector: PSD_I=9.17955e-008 PSD_ERR=7.04051e-009 PSD_N=171 "PSD.sim"
WARNING: file 'PSD.sim': Low Statistics (171 events in 128x128x1 bins).
Warning: 130 events were removed in Component[3] PSD=PSD_monitor()
                                (negative time, miss next components, rounding errors, Nan, Inf).

I tried using type=?text?, and ?float?, but the same problem persist. This was run on Windows7 x64, as well as on the Ubuntu live version available on the website and both gave the same results. Was also running on single CPU to rule out MPI problems.

Does anyone else also experience this or am I doing something wrong? Any suggestions?

Regards,
Deon




Deon Marais

Senior Engineer

Tel: +27 12 305 5645

Fax: +27 12 305 5851

Cell: +27 72 435 1137

Email: Deon.Marais at necsa.co.za

Website: www.necsa.co.za<http://www.necsa.co.za>



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From plt572 at alumni.ku.dk  Thu Sep 19 13:59:30 2013
From: plt572 at alumni.ku.dk (=?iso-8859-1?Q?Andreas_N=F8rg=E5rd_Larsen?=)
Date: Thu, 19 Sep 2013 11:59:30 +0000
Subject: [mcstas-users] mcgui does not work after shut down
Message-ID: <8CBF3DC2F416EA4F9764BA8F17E9A815636B@P1KITMBX01WC01.unicph.domain>

Dear MCSTAS experts,

I had mcstas installed and it worked. While I ran a simulation, my computer ran out of power and therefore shut down. It was without power for some hours.

When I turned on the computer again, the mcgui did not work.

I have Mac OS X 10.6.8 (Snowleopard).

when I try to run mcgui in the terminal, nothing happens. This is all I see:

    Andreas-Nrgard-Larsens-MacBook-Pro:perl andreashlarsen$ mcgui


X11 doesn't even start. I can run mcstas with mcrun from terminal.

Since it worked before, I guess it would solve the problem to reinstall mcstas. How can I do that? I couldn't find any help on mcstas.org.

I hope you can help.

Best,
Andreas Larsen

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From plt572 at alumni.ku.dk  Sun Sep 22 00:14:28 2013
From: plt572 at alumni.ku.dk (=?iso-8859-1?Q?Andreas_N=F8rg=E5rd_Larsen?=)
Date: Sat, 21 Sep 2013 22:14:28 +0000
Subject: [mcstas-users] mcgui does not work after shut down
In-Reply-To: <8CBF3DC2F416EA4F9764BA8F17E9A815636B@P1KITMBX01WC01.unicph.domain>
References: <8CBF3DC2F416EA4F9764BA8F17E9A815636B@P1KITMBX01WC01.unicph.domain>
Message-ID: <8CBF3DC2F416EA4F9764BA8F17E9A8156407@P1KITMBX01WC01.unicph.domain>

Problem solved! The problem was not due to McStas, but to X11, which didn't work after shut down. After deleting the old X11 installation and installing it again (from http://xquartz.macosforge.org/landing/), the mcgui worked.

Best,
Andreas Larsen


________________________________
Fra: mcstas-users-bounces at mcstas.org [mcstas-users-bounces at mcstas.org] p? vegne af Andreas N?rg?rd Larsen [plt572 at alumni.ku.dk]
Sendt: 19. september 2013 13:59
Til: mcstas-users at mcstas.org
Emne: [mcstas-users] mcgui does not work after shut down

Dear MCSTAS experts,

I had mcstas installed and it worked. While I ran a simulation, my computer ran out of power and therefore shut down. It was without power for some hours.

When I turned on the computer again, the mcgui did not work.

I have Mac OS X 10.6.8 (Snowleopard).

when I try to run mcgui in the terminal, nothing happens. This is all I see:

    Andreas-Nrgard-Larsens-MacBook-Pro:perl andreashlarsen$ mcgui


X11 doesn't even start. I can run mcstas with mcrun from terminal.

Since it worked before, I guess it would solve the problem to reinstall mcstas. How can I do that? I couldn't find any help on mcstas.org.

I hope you can help.

Best,
Andreas Larsen

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From farhi at ill.eu  Fri Sep 27 17:37:56 2013
From: farhi at ill.eu (Emmanuel FARHI)
Date: Fri, 27 Sep 2013 17:37:56 +0200
Subject: [mcstas-users] iFit 1.5 released
Message-ID: <5245A654.2050106@ill.eu>

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